Stats
Why does a Bayesian approach make sense for monitoring accrual? (May 8,
2008).
I'm working with Byron Gajewski to develop some models for monitoring the
progress of clinical trials. Too many researchers overpromise and undeliver
on the planned sample size and the planned completion date of their research.
This leads to serious delays in the research and inadequate precision and
power when the research is completed. We want to develop some tools that will
let researchers plan the pattern of patient accrual in their studies. These
tools will also let the researchers carefully monitor the progress of their
studies and let them take action quickly if accrual rates are suffering.
We've adopted a Bayesian approach for these tools. While a Bayesian
approach to Statistics is controversial, we feel that there should be no
controversy with regard to using Bayesian models in modeling accrual.
There are lots of humorous quips about Bayesian statistics. One of my
favorites is from Stephen Senn.
- "Bayesian: One who, vaguely expecting a horse and catching a glimpse
of a donkey, strongly concludes that he has seen a mule." Statistical
Issues in Drug Development, 2nd edition, Senn SJ (2007) page 46.
This quip alludes to the classic lay description of Bayesian Statistics.
The Bayesian asks a researcher to summarize their state of belief about a
statistical model prior to the collection of data. This produces probability
distributions (prior distributions) for various parameters in the statistical
model. After the data is collected, the Bayesian statistician will combine
that data with the prior distribution to produce a posterior distribution and
calculate expected values of the posterior distribution (along with other
quantities from the posterior distribution) to draw conclusions from the
data. Frequently, the expected values from the posterior distribution
represent a weighted average of the data and of the prior beliefs. If the
prior beliefs are strong relative to the data, more weight is placed on the
prior distribution. If the sample size of the data is large relative to the
degree of certainty provided by the prior distribution, then more weight is
placed on the data.
There is a belief among some critics of Bayesian Statistics that the prior
distribution allows subjective beliefs to be incorporated into an otherwise
objective analysis. A true scientist should be disinterested in the results
of the research so as to maintain the credibility of the research findings.
There are several counterarguments to this criticism, of course, and others
can make these counter-arguments better than I can.
From the perspective of accrual, however, there should be no debate. A
researcher would never undertake a clinical trial unless he/she had a least
an inkling of how quickly patients would volunteer for the trial. Soliciting
such beliefs does no harm to the supposed objectivity of the final data
analysis. In fact, you can use a Bayesian model for accrual for a clinical
trial where all of the proposed data summaries are classical non-Bayeisan.
The big advantage to specifying a prior distribution is that when a
researcher has extensive experience in given research arena and provides
appropriately precise prior distributions, that will prevent the researcher
from overreacting to a bit of early bad news about accrual. In contrast when
a researcher provides only a vague prior distribution about accrual patterns,
early evidence of problems is given greater weight, allowing for rapid
interventions to correct the slow accrual.
2008-07-14. Category: Accrual problems in
clinical trials, Category:
Bayesian statistics